Proteomics Journal Club

Public Education pages
Proteomics Symposium | Public Open House | Proteomics Mini-courses
Proteomics Journal Club | Proteomics Training Program

Together with other mass spectrometry facilities on campus, the Human Proteomics Program sponsors monthly seminars designed to disseminate information about new technologies and their application to problems in disease proteomics.





Aug. 28, 2008

Rm 116, SMI

Jonathan Pleitner  

Quantitative comparison of sarcomeric phosphoproteomes of neonatal and adult rat hearts Am J Physiol Heart Circ Physiol 295: H647–H656, 2008

July 17, 2008 

Room 3330 HSLC

Jeffrey Porter

Mass Spectrometry Based Quantitative Proteomics:  Applications of 18O Labeling and Protein-AQUATM

June 26, 2008

Rm 116, HSLC

Brian Hoffman

Proteomic Exploration of Transglutaminase Cross-linking In the Platelet Plug

May 29, 2008


Rm116, SMI

Aaron Vollrath 

"Extending top-down mass spectrometry to proteins with masses greater than 200 kilodaltons". Han X, Jin M, Breuker K, McLafferty FW (2006).  Science 314 (5796): 109–12. 

April 3, 2008

Rm. 281 SMI

James Dowell and Matt Lawrence

Spectral Counting for Quantitative Proteomics.

Feb. 21, 2008

Rm 116, SMI, MSC

Jeff Walker

Discussing the 2008 Human Proteomics Program Workshop to be held October 6-8. 2008 at the BioPharmaceutical Technology Institute

Jan 10, 2008

Rm 116, SMI, MSC­

Peter Chen

Lindsey ML, Goshorn DK, Comte-Walters S, Hendrick JW, Hapke E, Zile MR, Schey K.  A multidimensional proteomic approach to identify hypertrophy-associated proteins.  Proteomics. 2006 Apr;6(7):2225-35.

May 24, 2007

Rm 116, SMI, MSC

Cao Yuan

Quantitative Comparison of Myofilament Phospho-Proteomes of Neonatal and Adult Rat Hearts-A Mass Spectrometry Approach. 

Apr. 26, 2007

Rm 3330, HSLC

Brian Hoffman

Identification of factor XIIIA-reactive glutamine acceptor and lysine donor sites within fibronectin-binding protein (FnbA) from Staphylococcus aureus.  Anderson ET, Fletcher L, Severin A, Murphy E, Baker SM, Matsuka YV.  Biochemistry. 2004 Sep 21;43(37):11842-52.

Mar. 29, 2007

Rm 116, SMI, MSC

Fumin Li

Applications of Gas-Phase Separations in Combination with Mass Spectrometry for Proteomics

Feb. 22, 2007

Rm 116, SMI

Inna Rybakova

Myosin binding protein C is differentially phosphorylated upon myocardial stunning in canine and rat hearts—evidence for novel phosphorylation sites.  Yuan C, Guo Y, Ravi R, Przyklenk K, Shilkofski N, Diez R, Cole RN, Murphy AM.  Proteomics, 2006, 6, 4176-4186.

Jan. 18, 2007

Rm 3330, HSLC

Joshua Schmidt

Differential exoprotease activities confer tumor-specific serum peptidome patterns.
Villanueva J, Shaffer DR, Philip J, Chaparro CA, Erdjument-Bromage H, Olshen AB, Fleisher M, Lilja H, Brogi E, Boyd J, Sanchez-Carbayo M, Holland EC, Cordon-Cardo C, Scher HI, Tempst P.  Journal of Clinical Investigation, 2006, 116, 271-284.

Dec. 14, 2006

Rm 116, SMI

Ed Huttlin

An evaluation, comparison, and accurate benchmarking of several publicly available MS/MS search algorithms: Sensitivity and specificity analysis.
Kapp, Schutz, Connolly, Chakel, et al.   Proteomics, 2005, 5, 3475-3490.

Nov. 16, 2006

Rm 3330, HSLC

Manish Patankar

Profiling of Glycans in Serum for the Discovery of Potential Biomarkers for Ovarian Cancer.
An HJ, Miyamoto S, Lancaster KS, Kirmiz C, Li B, Lam KS, Leiserowitz GS, Lebrilla CB.  J Proteome Res. 2006 Jul; 5(7):1525.

Oct. 19, 2006

Rm 116, SMI

Martha Vestling

Direct molecular analysis of whole-body animal tissue sections by imaging MALDI mass spectrometry
S. Khatib-Shahidi, M. Andersson, J. L. Herman, T. A. Gillespie, R. M. Caprioli.  Analytical Chemistry 78: 6448-6456 (2006).

Sept. 21, 2006

Rm 3330, HSLC

Ying Ge

Proteomic in clinical trials and practice: present uses and future promise Azad, NS; Rasool, N.; Annunziata, CM; Minasian, L.; Whitely, G.; Kohn, EC  (2006) Mol. Cell. Proteomics. In press.

Aug. 24, 2006

Rm 281, SMI

Jeff Walker

Proteomic identification of nitrated proteins in Alzheimer’s disease brain Castegna A, Thongboonkerd V, Klein JB, Lynn B, Markesbery WR, Butterfield DA.  (2003) J. Neurochem.  85, 1394-1401.

If you would like to join proteomics journal club or host a discussion session, please contact Dr. Ying Ge.